PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI02G12070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family CPP
Protein Properties Length: 456aa    MW: 50876.5 Da    PI: 7.7586
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI02G12070.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR50.63.7e-16116155140
              TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                      k++kgC+C+ks+ClkkYCeCf+a+  Cs++C+C+dCkN e
  ORUFI02G12070.1 116 KHNKGCHCRKSECLKKYCECFQANILCSKNCRCQDCKNFE 155
                      589***********************************65 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5163429.07437156IPR005172CRC domain
PfamPF036389.7E-54768IPR005172CRC domain
SMARTSM011140.224771IPR033467Tesmin/TSO1-like CXC domain
SMARTSM011147.6E-18116157IPR033467Tesmin/TSO1-like CXC domain
PfamPF036382.3E-12119154IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MPPVRSAPVA PPPPPPPPQQ KKPAVPVSRP WPMSFTPHPP PPPPPPYCEC FAARVYCDGC  60
HCSPCGNKIE NENIRKEAIE TILLRNPLAF QPKIENSPNT VTVRKDNSEA IPPIPKHNKG  120
CHCRKSECLK KYCECFQANI LCSKNCRCQD CKNFEGSEER KALVQMKNAS DRNHIQEAAN  180
FALNGATGSL GYKNSPVRRK KYQENSLGEQ ILSEAQFQPT DHADVSQLAS SCTGFGGDIA  240
INYQSKSSEM IYRSPLANTI PLIEVNDLVK NALVACRKAP EAFLTKAGNK VEMQAEKQYQ  300
TNDEINNDKT KEQNLKEASL KDIQNKACID RQNINGTEPH LANSFKDSRP ASPGTQALMC  360
DEMDTTFGNE DYRSPFVVPS RDQDISELNA DQERIVLTGL RDYLRVLITR GNINEPNGRC  420
HSNQILVRDS NGIGFPEASW SNNCFFPRQI YVFQLS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
GenBankAP0047710.0AP004771.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0413A11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015623619.10.0PREDICTED: protein tesmin/TSO1-like CXC 5
RefseqXP_015623618.10.0PREDICTED: protein tesmin/TSO1-like CXC 5
TrEMBLA0A0E0NCY40.0A0A0E0NCY4_ORYRU; Uncharacterized protein
STRINGLOC_Os02g17460.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57552653
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.12e-71Tesmin/TSO1-like CXC domain-containing protein