PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI01G28110.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 374aa    MW: 40078.4 Da    PI: 9.6538
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI01G28110.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.54.5e-21223285163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      +ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN++L+ e+++l++ ++kl+ e+
  ORUFI01G28110.1 223 DKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRREISRLTESSKKLRLEN 285
                      689********************************************************9887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077779.1E-28193IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1704.5E-17220282No hitNo description
SMARTSM003381.7E-20223287IPR004827Basic-leucine zipper domain
PfamPF001704.2E-19224285IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.599225288IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-10227281No hitNo description
CDDcd147025.71E-22228276No hitNo description
PROSITE patternPS000360230245IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MGNDEAVVTQ KMGKAPSPPK DHPALSPYLD WSNMQAYYGP GILPPTFFSP GIAAGHTPPP  60
FILGPQPLVP SAFGKPYAAI YPPGGAFSHP FMPLMVSPLS MEPAKSVNSK DNCSNKKMKE  120
IDGAAVSTGS GNSEKTSGDC SLEGSSDGNN QKASGTPKKR SIDDRPKSGV ETGGALTPND  180
RPSEQAALPN LCIPVTAIKP DVSTASDFRV IATPVTEVPT KDDKESKRER RKQSNRESAR  240
RSRLRKQAET EELARKVELL TAENTSLRRE ISRLTESSKK LRLENSALME KLTETGPDEA  300
QEVPPVKTKA QQARGVENFL SMIDKTGTPR SSGHMDHAIA TPKLRQLLGS GLATDAVAAR  360
KPSNFDLLPL PAFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1239245RRSRLRK
2239246RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY3331840.0AY333184.1 Oryza sativa (japonica cultivar-group) G-box binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015650461.10.0PREDICTED: common plant regulatory factor 1 isoform X1
RefseqXP_015650471.10.0PREDICTED: common plant regulatory factor 1 isoform X1
TrEMBLA0A0E0N0850.0A0A0E0N085_ORYRU; Uncharacterized protein
STRINGLOC_Os01g46970.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-48G-box binding factor 3