PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI01G12420.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 302aa    MW: 33601.9 Da    PI: 9.3492
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI01G12420.3genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.82.4e-084369329
                     XXCHHHCHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeie 29
                     + k  rr+++NReAAr+sR+RKka+  
  ORUFI01G12420.3 43 DQKTLRRLAQNREAARKSRLRKKAKAY 69
                     56889******************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-53676No hitNo description
PfamPF077167.0E-54269IPR004827Basic-leucine zipper domain
PROSITE patternPS0003604863IPR004827Basic-leucine zipper domain
PfamPF141444.2E-34100175IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MADMSPRTDT STDDTDDNHM LEPGQLALAA ASDSDRSKDK HEDQKTLRRL AQNREAARKS  60
RLRKKAKAYT TRTRIATSSS AGALAFDMEY ARWLEEHNRQ INELRSAVNA HAGDNELRGV  120
VDKIMSHYEE IFKQKGNAAK ADVFHVLSGM WKTPAERCFL WLGGFRPSEL LKLLSTQLEP  180
LTEQQLSGIA NLQQSSQQAE DALSQGMEAL QQSLAETLAG SLGSSGSTGN VANYMGQMAM  240
AMGKLGTLEN FLRQADNLRQ QTLQQMQRIL TTRQSARALL VISDYSSRLR ALSSLWLARP  300
KE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM9911680.0HM991168.1 Oryza sativa Japonica Group cultivar Dongjin putative TGA2-like protein 3 mRNA, complete cds.
GenBankAB0512960.0AB051296.1 Oryza sativa OsNIF3 mRNA for bZIP transcription factor, complete cds.
GenBankAK2427430.0AK242743.1 Oryza sativa Japonica Group cDNA, clone: J090049N20, full insert sequence.
GenBankKM0965710.0KM096571.1 Oryza sativa Indica Group histone-binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015621703.10.0PREDICTED: transcription factor HBP-1b(c38)
RefseqXP_015621704.10.0PREDICTED: transcription factor HBP-1b(c38)
SwissprotP239231e-179HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLA0A0E0FK560.0A0A0E0FK56_ORYNI; Uncharacterized protein
TrEMBLA0A0E0MUP80.0A0A0E0MUP8_ORYRU; Uncharacterized protein
STRINGLOC_Os01g17260.10.0(Oryza sativa Japonica Group)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-106bZIP family protein