PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI01G12420.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 336aa    MW: 37605.2 Da    PI: 7.7946
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI01G12420.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.6e-104385345
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                     + k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  ORUFI01G12420.1 43 DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 85
                     56889*************************9877777766554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.1E-93589No hitNo description
SMARTSM003381.0E-44198IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4384387IPR004827Basic-leucine zipper domain
PfamPF001701.4E-74485IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.02E-74592No hitNo description
PROSITE patternPS0003604863IPR004827Basic-leucine zipper domain
PfamPF141445.1E-34134209IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MADMSPRTDT STDDTDDNHM LEPGQLALAA ASDSDRSKDK HEDQKTLRRL AQNREAARKS  60
RLRKKAYVQQ LENSRLKLTQ LEQELQRARQ QAYGNFSQGI FISSSVDQTH SMSGNGALAF  120
DMEYARWLEE HNRQINELRS AVNAHAGDNE LRGVVDKIMS HYEEIFKQKG NAAKADVFHV  180
LSGMWKTPAE RCFLWLGGFR PSELLKLLST QLEPLTEQQL SGIANLQQSS QQAEDALSQG  240
MEALQQSLAE TLAGSLGSSG STGNVANYMG QMAMAMGKLG TLENFLRQAD NLRQQTLQQM  300
QRILTTRQSA RALLVISDYS SRLRALSSLW LARPKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM9911680.0HM991168.1 Oryza sativa Japonica Group cultivar Dongjin putative TGA2-like protein 3 mRNA, complete cds.
GenBankAB0512960.0AB051296.1 Oryza sativa OsNIF3 mRNA for bZIP transcription factor, complete cds.
GenBankAK2427430.0AK242743.1 Oryza sativa Japonica Group cDNA, clone: J090049N20, full insert sequence.
GenBankKM0965710.0KM096571.1 Oryza sativa Indica Group histone-binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015621703.10.0PREDICTED: transcription factor HBP-1b(c38)
RefseqXP_015621704.10.0PREDICTED: transcription factor HBP-1b(c38)
SwissprotP239230.0HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLA0A0E0FK580.0A0A0E0FK58_ORYNI; Uncharacterized protein
TrEMBLA0A0E0MUP60.0A0A0E0MUP6_ORYRU; Uncharacterized protein
STRINGLOC_Os01g17260.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.51e-142TGACG motif-binding factor 6