PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC09G15260.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 227aa    MW: 24492.2 Da    PI: 4.4835
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC09G15260.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.4e-183385155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                     + y+GVr++ + grWv+e+r+p   g +  r +lg+f tae Aa+a++aa ++l g
  OPUNC09G15260.1 33 PVYRGVRRRGRAGRWVCEVRVP---GrRGSRLWLGTFATAETAARAHDAAVLALCG 85
                     68*******************9...6455*********************999866 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-123385IPR001471AP2/ERF domain
PROSITE profilePS5103221.2983493IPR001471AP2/ERF domain
SMARTSM003807.3E-213499IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.4E-293495IPR001471AP2/ERF domain
SuperFamilySSF541716.15E-193495IPR016177DNA-binding domain
PRINTSPR003671.3E-53546IPR001471AP2/ERF domain
CDDcd000181.15E-154795No hitNo description
PRINTSPR003671.3E-55975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MDVEETAAMY RTVWSEPPKR PAGRTKFRET RHPVYRGVRR RGRAGRWVCE VRVPGRRGSR  60
LWLGTFATAE TAARAHDAAV LALCGRGACL NFADSAWRMP PVPVAALAGA REVKDAVAEA  120
VEAFQRQSAQ SQSVASTAPS SPAETFAADD DDEEEDDDKD VLPVAAVSVV PDDGGAFELD  180
DGFRFGGMDA ASYYVSLAQG LLVEPPAAGA WWEDGELAAS DMPLWSY
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Confers resistance to high salt, cold and drought stress (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015610928.26e-97dehydration-responsive element-binding protein 1B, partial
SwissprotQ8GUW42e-97DRE1B_ORYSI; Dehydration-responsive element-binding protein 1B
TrEMBLA0A0E0M3J91e-160A0A0E0M3J9_ORYPU; Uncharacterized protein
STRINGOPUNC09G15260.11e-161(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-20dehydration response element B1A