PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC08G14840.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 242aa    MW: 25592.2 Da    PI: 4.4543
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC08G14840.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.1e-172776255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +ykGVr +k +grWv+eIr p++   r r++lg++ +ae+Aa+a +aa+ +l+g
  OPUNC08G14840.1 27 RYKGVRLRK-WGRWVSEIRMPNS---RERIWLGSYESAEKAARAFDAAAVCLRG 76
                     7******99.**********933...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.8E-312792IPR001471AP2/ERF domain
CDDcd000188.29E-182788No hitNo description
Gene3DG3DSA:3.30.730.101.1E-262788IPR001471AP2/ERF domain
PROSITE profilePS5103221.972786IPR001471AP2/ERF domain
PfamPF008473.0E-102776IPR001471AP2/ERF domain
SuperFamilySSF541714.77E-182787IPR016177DNA-binding domain
PRINTSPR003671.6E-82839IPR001471AP2/ERF domain
PRINTSPR003671.6E-85066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MDHIGISSGG GGEGGVAPMQ PSSPERRYKG VRLRKWGRWV SEIRMPNSRE RIWLGSYESA  60
EKAARAFDAA AVCLRGSRGA GSLNFPESPP DVRHFPGALL TVEQIQAEAA RHANRPYPGA  120
ATAAANTTAG AAGSSSYSQQ QATAPARSTS NDTAMSGPST DGGAADYGGG DDDVIDWSFM  180
DALPAMSASS PASTNAELVP AMDDFMYGFL HTMPPCEDGG EEDVMIDGNM DQTFFSVDLW  240
RF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0046621e-140AP004662.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0048G02.
GenBankAP0149641e-140AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015649307.11e-113ethylene-responsive transcription factor ERF017
TrEMBLA0A0E0LVJ21e-176A0A0E0LVJ2_ORYPU; Uncharacterized protein
STRINGOPUNC08G14840.11e-177(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-23ERF family protein