PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G09830.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 418aa    MW: 46833.2 Da    PI: 4.778
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G09830.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.92.5e-33581971128
              NAM   1 lppGfrFhPtdeelvveyLkkk..vegkk...leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....s 80 
                      lp+G++F+Ptd+el+++ L+k+  v +k    +++  +i++v+    i++++P++Lp  vk++ +  +fF+++ k+y+tg rk+r+++     +
  OPUNC06G09830.1  58 LPRGVKFDPTDQELLWHLLAKHgkVGAKAhpfIDE--FIPTVEeddgICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGIRKRRKINtgdlaD 148
                      799************99998862255555444233..2444422245**********.677888899******************866334446 PP

              NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                       +W++tgk+k+v++ +ge+ g+kk++v+y  + +  k+ekt+Wvmh+y+l
  OPUNC06G09830.1 149 VRWHKTGKTKPVVV-DGEHLGCKKIMVLYmsTMKGGKPEKTNWVMHQYHL 197
                      67************.999***********6534666777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3843216IPR003441NAC domain
PROSITE profilePS5100530.12958216IPR003441NAC domain
PfamPF023651.6E-1459197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MTGTSWIIDS HRIASKIKNA SGSVDASKQK WVSNPTKACP RCNHIIDNSD VVHQWPGLPR  60
GVKFDPTDQE LLWHLLAKHG KVGAKAHPFI DEFIPTVEED DGICYTHPQK LPGVKQDGSV  120
SHFFHRTFKA YNTGIRKRRK INTGDLADVR WHKTGKTKPV VVDGEHLGCK KIMVLYMSTM  180
KGGKPEKTNW VMHQYHLGTG EDEVEGQYVV SKLFFQQQFK PGEKNAQDLS SADALESIVA  240
EDLPNIPPLP LEEHVFTNQE LEILEKSETI TDQGKETSEI NNEDNAVEDV VHMATEKPED  300
GDNPSSQDPK WWEGESQFLL DSQQLAENLA ICDEFLQSQS QTSCGGGDDE PDKIKPRLAV  360
YAQLPVEDLK KDLEECQRLD PSDGANLELE NASEFRLSQI EFSQDSFTTA WAGGKVID
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0604340.0AK060434.1 Oryza sativa Japonica Group cDNA clone:001-011-B08, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015640881.10.0PREDICTED: NAC domain-containing protein 8
SwissprotQ6NQK21e-142NAC8_ARATH; NAC domain-containing protein 8
TrEMBLA0A0E0LA920.0A0A0E0LA92_ORYPU; Uncharacterized protein
STRINGBGIOSGA022664-PA0.0(Oryza sativa Indica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-144NAC family protein