PlantTFDB
Plant Transcription Factor Database
v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC04G08570.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family CAMTA
Protein Properties Length: 1018aa    MW: 114033 Da    PI: 6.4569
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC04G08570.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11651.3e-51111332117
             CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpks......gsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 
                      +ke ++rwlk++e++ iL+n+e++ +t e++++p+s      gsl+Lynr++ ryfr+DG+ w++kkdg+tv E+he+LKvg+v++l+cyYah+
  OPUNC04G08570.1  11 HKEaRRRWLKPSEVYYILQNHERFPITPEPPKKPPSvvrcpgGSLFLYNRRVNRYFRRDGHAWRRKKDGRTVGEAHERLKVGNVDALSCYYAHG 104
                      677799**************************99865555559*************************************************** PP

             CG-1  89 eenptfqrrcywlLeeelekivlvhylev 117
                      e+np fqrrc+w+Le ++e+ivlv+y+ev
  OPUNC04G08570.1 105 EQNPCFQRRCFWMLEPAYEHIVLVQYREV 133
                      ***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143774.4527139IPR005559CG-1 DNA-binding domain
SMARTSM010765.8E-6510134IPR005559CG-1 DNA-binding domain
PfamPF038593.9E-4313132IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.6E-5446534IPR013783Immunoglobulin-like fold
SuperFamilySSF812966.3E-15446528IPR014756Immunoglobulin E-set
PfamPF018338.1E-7446527IPR002909IPT domain
SuperFamilySSF484031.71E-15477521IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.204.7E-16641737IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.71E-15641738IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.114643735IPR020683Ankyrin repeat-containing domain
CDDcd002041.78E-13648735No hitNo description
PfamPF127964.7E-7659737IPR020683Ankyrin repeat-containing domain
SMARTSM002487.1E-4676705IPR002110Ankyrin repeat
PROSITE profilePS5008810.259676708IPR002110Ankyrin repeat
SMARTSM002481800715744IPR002110Ankyrin repeat
SMARTSM0001527796818IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.529797826IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525401.33E-6852902IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500967.95855884IPR000048IQ motif, EF-hand binding site
SMARTSM0001519856876IPR000048IQ motif, EF-hand binding site
PfamPF006120.022857875IPR000048IQ motif, EF-hand binding site
SMARTSM000151.7E-6877899IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.64878906IPR000048IQ motif, EF-hand binding site
PfamPF006121.4E-5879899IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1018 aa     Download sequence    Send to blast
MSLSFDINVL HKEARRRWLK PSEVYYILQN HERFPITPEP PKKPPSVVRC PGGSLFLYNR  60
RVNRYFRRDG HAWRRKKDGR TVGEAHERLK VGNVDALSCY YAHGEQNPCF QRRCFWMLEP  120
AYEHIVLVQY REVGPAEGRY NSASLLNGPT DSLSVLSYPN ATYGNQYLGS TSGVSDGSES  180
RHSNLSSVTE VSSYSANKDS GILRSIQELD QSTIMGAPAL GQSSLEQSIE VHRVDNSNST  240
NKSGLNRALK QIVEQLSLGD DEDDDYIHQA QPFDFITNIE APDRQRDASR NVSGDSQAIQ  300
IRAEEMQNSL GRGISSSWED VLQSSSAPHY PQNAEYQPPG SLYNSDMQQI SAAKRFLLET  360
EDSIDSPSYN YVPREGNNGT NTLSVHDYSL QSSLNPDWKK TAPLTLQSNS YGSEIPGLLL  420
DHGQFESLSS GENRRLTLGQ KQRFSIREFS PEWTYCYEIT KVIITGDFLC DPSSSCWAVM  480
FGDSEVPAEI VQAGVLRCHT PLRSSGKLTI CVTSGNREIC SEVKDFEFRA KSTASNFLDI  540
SPSSTSLKSS EELLLLAKFV RMLLCENGSH ANSNGDPQSG QYPKLKMNDE HWQRLIDELK  600
GGCEHPLNVS DWIMEELLKS KLQEWLSVKL QGYDGTACFL SKHEQGIIHL ISALGYEWAL  660
SSVLSAGVGV NFRDTNGWTA LHWAAYFGRE KMVAALLAAG VSAPAVTDPT AQDPVGKTAA  720
FLASERGHLG LAAYLSEVSL TSYLASLTIQ ESDTSKGSAA VEAERAVESI SQRNAQLHGG  780
TEDELSLKDS LAAVRNAAQA AARIQNAFRA FSFRKRQQKT ARLKDEYGMT QEDIDELAAA  840
SRSYYQSLLP NGQFYDKAAV SIQKKFKGWK GRRHFLNMRR NAVKIQAHVR GHQVRKKYKT  900
FVSTVSVLEK VILRWRRKGH GLRGFRAEQT AMAEAEEDDE DDDDDDDFND DEAVKMFRRQ  960
KVDESVKEAM SRVLSMVDSP EARMQYRRML EEFRQATDIT ANSHPKDEKD MLNSPKSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1220010.0AK122001.1 Oryza sativa Japonica Group cDNA clone:J033110J06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015635911.10.0PREDICTED: calmodulin-binding transcription activator 4 isoform X2
TrEMBLA0A0E0KPU00.0A0A0E0KPU0_ORYPU; Uncharacterized protein
STRINGLOC_Os04g31900.10.0(Oryza sativa Japonica Group)
STRINGORGLA02G0342600.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62383241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains