PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G11030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 266aa    MW: 27005.8 Da    PI: 4.5851
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G11030.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.6e-184897255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      ykGVr ++ +g+Wv+eIr p     +  +r++lg++ t+e Aa+a++aa ++l+g
  OPUNC03G11030.1 48 PYKGVRMRS-WGSWVSEIRAP-----HqkRRIWLGSYATPEAAARAYDAALLCLKG 97
                     59****998.**********7.....335************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575125No hitNo description
SMARTSM003805.3E-3548111IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.1E-2948107IPR001471AP2/ERF domain
PROSITE profilePS5103221.91848105IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-1949106IPR016177DNA-binding domain
PfamPF008475.7E-114997IPR001471AP2/ERF domain
CDDcd000185.80E-1949105No hitNo description
PRINTSPR003676.3E-84960IPR001471AP2/ERF domain
PRINTSPR003676.3E-87187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MVKNTSNKCI AAAAGVGGGG GAVSCSGGGG DGKVQTMATA EAALAVRPYK GVRMRSWGSW  60
VSEIRAPHQK RRIWLGSYAT PEAAARAYDA ALLCLKGSDA VLNFPSSSSS SAAASSRLLD  120
SRRDNAEYSA AGDMSPRSIQ RVAAAAAAAF DAGAIAATSV VVDDSCSCSA EATSSTPTSA  180
TTSLSTLGSA GGGDVLDHAT TPSSSSSAAA NVCSPPLEGD HELWTELDAF ASPKFMDLMA  240
DGGTAFSSPW EEPEEDGEIM RLWSFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-12491091576Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2267820.0AC226782.1 Oryza minuta clone OM__Ba0164C18, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015630150.11e-111ethylene-responsive transcription factor ERF013
TrEMBLA0A0E0KBL10.0A0A0E0KBL1_ORYPU; Uncharacterized protein
STRINGOPUNC03G11030.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108303040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.13e-21ERF family protein