PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G23190.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 795aa    MW: 86229.8 Da    PI: 8.3409
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G23190.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.6e-19213263256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  OPUNC02G23190.1 213 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 263
                      59******9.**********955...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.45E-30212272No hitNo description
PROSITE profilePS5103222.998213270IPR001471AP2/ERF domain
SMARTSM003805.9E-39213276IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.4E-32213271IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-22213271IPR016177DNA-binding domain
PRINTSPR003672.2E-10214225IPR001471AP2/ERF domain
PfamPF008475.6E-12214263IPR001471AP2/ERF domain
PRINTSPR003672.2E-10236252IPR001471AP2/ERF domain
Gene3DG3DSA:1.25.40.2804.0E-71449787IPR004328BRO1 domain
SMARTSM010413.7E-57452790IPR004328BRO1 domain
PROSITE profilePS5118030.079452795IPR004328BRO1 domain
CDDcd092462.41E-136453791No hitNo description
PfamPF030971.0E-65486782IPR004328BRO1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 795 aa     Download sequence    Send to blast
MDAADSGGGA RGRGRRWKGK GVSAAEAQQQ PTPVLEDAPA AAALLRPLKK IRSPDRRLQR  60
SLSSLSSAPA SPGSSSVSNP MSPPAMSLPN QPPSSRHIFP FAYDPSSGAA APRLLPLLQY  120
SSLYPQPLLP QQQPPLQHQQ MISFGSSQQQ QQPQYGAASP LFPPQFLPPE EQQRLLLRYW  180
SEALNLSPRG VRGGALPPSL YQHLLRAPGP PKLYRGVRQR HWGKWVAEIR LPRNRTRLWL  240
GTFDTAEDAA MAYDREAFKL RGENARLNFP DLFLGKGRTG GSGRTSASAA ASCSSSSSSA  300
PPTPDESHTQ QAQPQPRQHR EESSNTEPKP LLSGAEQDGI PEPEPNPQLQ TAEQHVSDGN  360
TAMFQPSVTS GGVWGPADEA WFSAWGPGSS VWDYDMDSAH GLLLQSRLAG EQTSMDYAYN  420
APEVLVAPAS PSPSPVAAVK AQRRAMSRPP SQMLSVPEKK TAAAELFRDR HFFNSAFFTD  480
LREARASLSA PSSQATTQDP SSRRALLLRY HRLLASARDD PCDFDDNLAF TWHDAFRPHL  540
RRTAASLRFE KAAVVFNVGA ASSRTAAAVD RAAEGGVKAA CGEFQRAAGA FRAAGEMMEG  600
EEEVTVDMGT EASAMLERLM LAQAQECCFE RALAAGTSSA ACSKVAKQAA LYYEEAYASL  660
VIPPLQNHFE RSWVAHILLK AALFNAEASY RYAIELHEKT EIGEEIARLQ FGINAIVDAK  720
KAARGAPGSL YDAASRLEQD MNQNLERALN ENNRIYLLRV PAAKLLAPLP AASLVRSVSL  780
SEILDVKTET GNQSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5cru_C9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5cru_D9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mjy_A9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mjy_B9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mjy_C9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mjy_D9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mjz_A9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mjz_B9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk0_A9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk0_C9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk1_A9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk1_B9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk1_C9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk1_D9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk2_A9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk2_B9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk3_A9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk3_B9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk3_C9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
5mk3_D9e-2553177695340Tyrosine-protein phosphatase non-receptor type 23
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126100.0CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0K2U20.0A0A0E0K2U2_ORYPU; Uncharacterized protein
STRINGOPUNC02G23190.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1180622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.11e-36ERF family protein