PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G17840.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 67aa    MW: 7954.26 Da    PI: 12.2609
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G17840.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.23.4e-072952327
              AP2  3 ykGVrwdkkrgrWvAeIrdpse.ng.k 27
                     y+G r   ++g+WvAeIrdp++ +g +
  OPUNC02G17840.1 29 YRGMR---RWGKWVAEIRDPRKlGGaR 52
                     77886...6**********98876652 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.1E-52947IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    Send to blast
MYSARWSCHE ASKGSVVVPE TVSLQVWRYR GMRRWGKWVA EIRDPRKLGG ARLARYLRHR  60
RGRGTRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0K0W71e-39A0A0E0K0W7_ORYPU; Uncharacterized protein
STRINGOPUNC02G17840.12e-40(Oryza punctata)