PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G25730.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WOX
Protein Properties Length: 480aa    MW: 48745.6 Da    PI: 6.6662
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G25730.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.51.6e-0671893957
                     S-HHHHHHHHHHHHHHHHC CS
         Homeobox 39 LterqVkvWFqNrRakekk 57
                     + +++V++WFqNr+ + k+
  OPUNC01G25730.1 71 VGDANVFYWFQNRKSRSKN 89
                     6789************995 PP

2Wus_type_Homeobox42.91.2e-1466904064
  Wus_type_Homeobox 40 eeyGkiedkNVfyWFQNrkaRerqk 64
                       +eyG+++d+NVfyWFQNrk+R+++k
    OPUNC01G25730.1 66 SEYGQVGDANVFYWFQNRKSRSKNK 90
                       79*********************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MASSNRHWPS MFRSKHATQP WQTQPDMAGS PPSLLSGSSA GSAGGGGGGG YSGLKSSPFS  60
SGLAASEYGQ VGDANVFYWF QNRKSRSKNK LRSGTGRAAL GLGSNRPCAT APREAVAPSF  120
TPPPILPPQP VQQQQQQLVS PVAAPTSSSS SSSDRSSGSS KPVRATSSQA MSVTAAMDLL  180
SPLAAACEQQ MLYQGQPLES PSAPAPAPAP RVHGIVAPDE PIFLQWPQSP CLSAVDLGAA  240
ILGGQYMHLP VPAAQPPSSP GAGGMFWGLC NDVSAPNNTG HKSCAWSAGL GQHWCGSADQ  300
LGLGKSSAAS IAAGLSRPEE AHDVDATKLG LLQYGFGITT PTVHVDVTSS AAGVLPPVPS  360
SLSPPDATVT VASVAATASL TDFAASAIST GAVANNQLQG LADFGLVAGG SGAGVVCVGV  420
AGAAPPLFYP AAHFNVRHYF GDEAELLRYR GDSRTEPVPV DESGVTVEPL QQGAVYIVLM
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126090.0CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025875666.10.0WUSCHEL-related homeobox 7
SwissprotQ0JKK60.0WOX7_ORYSJ; WUSCHEL-related homeobox 7
TrEMBLA0A0E0JM590.0A0A0E0JM59_ORYPU; Uncharacterized protein
STRINGOPUNC01G25730.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26663470
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33880.19e-14homeobox-3