PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G08670.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family DBB
Protein Properties Length: 357aa    MW: 37134.2 Da    PI: 6.3796
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G08670.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box17.96.4e-06444539
         zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                      C+ +e  e++  C  ++  lC+ C l+ H        H +
  ONIVA01G08670.1  4 LCSACEAAEARVLCCADDAALCARCDLHVHAAnrlagkHHR 44
                     7******99*********************55678888554 PP

2zf-B_box30.29e-1060100337
         zf-B_box   3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 
                      +++C+ +++ ++ +fC +++ llC+ C ++ H        H
  ONIVA01G08670.1  60 PPTCDICQDAHAYFFCVEDRALLCRACDVAVHTAnalvsaH 100
                      789***************************99545566666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.566147IPR000315B-box-type zinc finger
SMARTSM003363.9E-8147IPR000315B-box-type zinc finger
CDDcd000214.95E-6344No hitNo description
PROSITE profilePS501199.49958105IPR000315B-box-type zinc finger
SMARTSM003367.6E-1658105IPR000315B-box-type zinc finger
PfamPF006433.7E-86092IPR000315B-box-type zinc finger
CDDcd000215.10E-963105No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MKVLCSACEA AEARVLCCAD DAALCARCDL HVHAANRLAG KHHRLPLLSS SSSSSSSPSP  60
PTCDICQDAH AYFFCVEDRA LLCRACDVAV HTANALVSAH RRFLLTGVHV GLDAAADDDD  120
KHPPHPLSSS LPRNTAPPPQ PPPKRSPSPI YSDDDVIDWA TGGHDIGITG NLPDWSLVDE  180
QFNTPALPPV VTKTPPKRAS RGPVTAGTAA AVFGNLAGGS PDWPLNEFFG FADFSSGFGF  240
AENGTSKADS GKIGSMDGSP NGGRSSSSSS SSSAAAAAAG GGQDFFGQVP EVHWAVPELP  300
SPPTASGLHW QRDPRYGGGA TDASAVFVPD ISSPENPFRC FAAAGAGDHT MKRRRRC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2421760.0AK242176.1 Oryza sativa Japonica Group cDNA, clone: J075159I15, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015630321.10.0PREDICTED: B-box zinc finger protein 22
TrEMBLA0A0E0FI740.0A0A0E0FI74_ORYNI; Uncharacterized protein
STRINGLOC_Os01g10580.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP17943382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.15e-30light-regulated zinc finger protein 1