PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI06G21830.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 162aa    MW: 17012.8 Da    PI: 10.6812
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI06G21830.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.52.4e-1262122363
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      + ++err+++NRe+ArrsR R++ +++eL   v+eL a N++L+ el++     a++  e+
  OMERI06G21830.1  62 DERKERRLASNRESARRSRVRRRRQLDELSSHVAELRAANHRLAVELNRAAARHAQMAREN 122
                      6689********************************************9998888887765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-860110No hitNo description
SMARTSM003383.5E-760124IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.62262125IPR004827Basic-leucine zipper domain
PfamPF001701.2E-963122IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.34E-764112No hitNo description
PROSITE patternPS0003606782IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MAYQSFGAVD LAASFFFSSS SSSPQPGLVG VHGDRFLAAA GGGGGDGGGD GGAASGKGTR  60
RDERKERRLA SNRESARRSR VRRRRQLDEL SSHVAELRAA NHRLAVELNR AAARHAQMAR  120
ENARLAEEAR ALRERLLRGG GGEAEEEAGG GCGAEAILAP MD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126140.0CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0E4061e-105A0A0E0E406_9ORYZ; Uncharacterized protein
STRINGOMERI06G20250.11e-106(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2048088