PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI06G18670.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family BES1
Protein Properties Length: 400aa    MW: 42525.9 Da    PI: 8.5485
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI06G18670.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822194.83.1e-60632095149
           DUF822   5 rkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspesslqs 96 
                      + ++  ErEnn+rRERrRRaiaakiyaGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+  e+++ +g+sas sp+ss+q 
  OMERI06G18670.1  63 KAKPVWERENNRRRERRRRAIAAKIYAGLRAYGNYNLPKHCDNNEVLKALCHEAGWTVEPDGTTYRKGCKPPqaERPDPIGRSASPSPCSSYQ- 155
                      566777*****************************************************************99999*****************. PP

           DUF822  97 slkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvsss 149
                             +sp++sy++sp+sssfps+ s+++i++  +        +sl+p+l++l+l+ss 
  OMERI06G18670.1 156 -------PSPRASYNPSPASSSFPSSGSSSHITIGGNnliggvegSSLIPWLKTLPLSSSY 209
                      .......***************************98899*****99*******99987775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056879.5E-6663203IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MAAGRSRQLG GAGAGTGRGA PGSLAKSWRE AERRARVESC DGGGEERRDE KRRGGGEYDG  60
DEKAKPVWER ENNRRRERRR RAIAAKIYAG LRAYGNYNLP KHCDNNEVLK ALCHEAGWTV  120
EPDGTTYRKG CKPPQAERPD PIGRSASPSP CSSYQPSPRA SYNPSPASSS FPSSGSSSHI  180
TIGGNNLIGG VEGSSLIPWL KTLPLSSSYA PSSKFPQLHH LYFNGGSISA PVTPPSSSPT  240
RTPRLRTDWE NASVQPPWAS ANYTSLPNST PPSPGHKIAP DPAWLAGFQI SSAGPSSPTY  300
NLVSPNPFGI FKEAIASTSR VCTPGQSGTC SPVMGGMPAH HDVQMVDGAP DDFAFGSSSN  360
GNNESPGLVK AWEGERIHEE CASDELELTL GSSKTRADPS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1012290.0AK101229.1 Oryza sativa Japonica Group cDNA clone:J033031H19, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015641160.10.0PREDICTED: protein BZR1 homolog 3
SwissprotQ5Z9E50.0BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLA0A0E0E2S90.0A0A0E0E2S9_9ORYZ; Uncharacterized protein
STRINGBGIOSGA023073-PA0.0(Oryza sativa Indica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.13e-64BES1/BZR1 homolog 4