PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI05G18990.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 335aa    MW: 35484.9 Da    PI: 6.9849
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI05G18990.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.15.4e-15265308548
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++Lkk+
  OMERI05G18990.2 265 RRQKRMIKNRESAARSRARKQAYTNELENKVLRLEEENERLKKQ 308
                      79***************************************965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-14259308No hitNo description
SMARTSM003388.2E-10261317IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.553263308IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-10265310No hitNo description
PfamPF001701.4E-12265308IPR004827Basic-leucine zipper domain
CDDcd147071.30E-24265312No hitNo description
PROSITE patternPS000360268283IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MIQAMASHAG GSGGGGGGSG RDAGSAQRGP MQGLARQGSL YGLTLNEVQS QLGEPLLSMN  60
LDELLKSVFP DGADLDGGGG GGGVAGQSQP ALGLQRQGSI TMPPELSKKT VDEVWKGIQD  120
VPKRGAEEGG RRRRERQPTL GEMTLEDFLV KAGVVTDPND LPGNMDVVGG AAAAAAGTSD  180
LNAGAQWLQQ YHQQALEPQH PSIGAPYMAT HLAPQPLAVA TGAVLDPIYS DGQITSPMLG  240
ALSDPQTPGR KRGATGEIAD KLVERRQKRM IKNRESAARS RARKQAYTNE LENKVLRLEE  300
ENERLKKQKE LDEILNSAPP PEPKYQLRRT SSAAF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129136GRRRRERQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0633980.0AK063398.1 Oryza sativa Japonica Group cDNA clone:001-114-H11, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638733.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
SwissprotQ9LES33e-86AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0E0DTB70.0A0A0E0DTB7_9ORYZ; Uncharacterized protein
STRINGOMERI05G18080.20.0(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27073883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-64ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]