PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI05G15750.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 571aa    MW: 62939.1 Da    PI: 7.6173
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI05G15750.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.3e-11261290433
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                       k err+++NReAAr+sR+RKka++++Le+
  OMERI05G15750.1 261 AKTERRLAQNREAARKSRLRKKAYVQQLET 290
                      699*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-6258334IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.381260304IPR004827Basic-leucine zipper domain
PfamPF001701.3E-7261291IPR004827Basic-leucine zipper domain
CDDcd147084.11E-20262314No hitNo description
Gene3DG3DSA:1.20.5.1706.0E-7262291No hitNo description
SuperFamilySSF579591.61E-6262305No hitNo description
PROSITE patternPS000360265280IPR004827Basic-leucine zipper domain
PfamPF141445.8E-29343417IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MGLRCLLLQT RPAYWPKGLY LNASSPAATR IVAGGTPAAA TTEKRGENHT LNTRPLPPLA  60
ATESTARLLS STAGGIRLHR SHGKMKLQGG FDLPVWEKTN RKRSNILSCA AAYFGELEKA  120
LIHGTSAGAG VDHGMIQSDA YTESAGYLAA RPPTLEIFPS WPMSHLQEPY SNSQSVGSTT  180
DSSSAQNTMS QAELVSPASM RSDSGQEQQQ QEVLMVTIDD YNYKQGLGAA IATAPSFQQH  240
AGGLDMRKHG STRKDGKLLD AKTERRLAQN REAARKSRLR KKAYVQQLET SRIRLQQIEQ  300
ELQRARSQGL FPGGCSAPGD MSSGAVMFDM EYTRWIDDDS KCMAELQGAL QAQLPDGNLG  360
AIVEECMRHY DELFHLRAVL ASSDVFHLMT GMWAAPAERC FLWMAGFRPS EILKMLIPQL  420
DPLTEQQLMG MCSLQQSSEQ TEEALAQGLH QLHQSLADAV GGGPLNDGAD VANYTGLMAL  480
ALGRLENLES FYRQADNLRQ ETLHHMRRIL TTRQTARCFL SIGEYNRRLR ALSSLWASRP  540
RENFIATENV SPTGTEFQVI QQSQQNQFSG F
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1095200.0AK109520.1 Oryza sativa Japonica Group cDNA clone:002-113-G01, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015639066.10.0transcription factor TGAL5 isoform X10
SwissprotQ6F2N00.0TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBLA0A0E0DS060.0A0A0E0DS06_9ORYZ; Uncharacterized protein
STRINGOMERI05G15000.10.0(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-136bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]