PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI03G32810.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 162aa    MW: 17611 Da    PI: 11.9134
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI03G32810.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.92.4e-144998150
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                     e+e++r+rrk +NR++ArrsR+RK++++eeL+ +++ L aeN++L+ +l 
  OMERI03G32810.1 49 EEERRRQRRKVSNRLSARRSRARKQQRLEELRGESARLRAENRELAARLH 98
                     7899*****************************************99886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-104599No hitNo description
SMARTSM003381.0E-948113IPR004827Basic-leucine zipper domain
PfamPF001701.0E-94998IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.88751102IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-853100No hitNo description
PROSITE patternPS0003605671IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MTSGFGFTPW AADTCPTLEQ LMAASSSPSP SSSLDDNAAA AENGEVEEEE ERRRQRRKVS  60
NRLSARRSRA RKQQRLEELR GESARLRAEN RELAARLHAV ARHGLAARCQ NARLRAEAAA  120
LARRLLALQR LARGRHMMIT ASPPPPPPTA PGAAAVLASL MA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16572RRSRARKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1072070.0AC107207.9 Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence.
GenBankAC1334500.0AC133450.6 Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence.
GenBankAP0149590.0AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015630261.13e-43ocs element-binding factor 1
TrEMBLA0A0E0D7G81e-107A0A0E0D7G8_9ORYZ; Uncharacterized protein
STRINGOMERI03G32130.11e-108(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138452429