PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI02G34900.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 861aa    MW: 95471 Da    PI: 4.7172
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI02G34900.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.11.6e-12646670125
          G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                      kpr+rWtpeLHerFv+av++LGGse
  OMERI02G34900.2 646 KPRMRWTPELHERFVDAVNKLGGSE 670
                      79*********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF111072.3E-461211No hitNo description
PfamPF111071.2E-18218347No hitNo description
SuperFamilySSF466891.43E-6643672IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-17645718IPR009057Homeodomain-like
PfamPF002493.6E-6648675IPR001005SANT/Myb domain
SuperFamilySSF466891.43E-6701718IPR009057Homeodomain-like
PfamPF143794.4E-18753795IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 861 aa     Download sequence    Send to blast
MEELLGLVRG FVDVLVLAGG RTSSGAAATW RSGDVKKALQ WALFFEEVFK NLRDDGQYDE  60
SARELDAALV QLTSSPNFPK GIEDIRSKTL ATARELVLKH FLKTTNAENL GAVLQAVVEM  120
DMDGISASGE RSVCQEYVQS ILDMNLPSLM RTKNACDVGY STSSDEFCEE SLFMGNSQIL  180
LKELQKKLDS GSCISLAERE LNTLLKSMKK DSFDSAGSTL CTSATAQKTQ IVDKFILWKQ  240
WKAKCLLYLL DERTIRIMSG TNLIFNAPKE QWMGLFEPLK VSADSSQSGI IEVMELCLLG  300
LVARQWNSLI ESFMSHTFSS FPISKQYADL HQLLQGTTQD ECQDKLLGFK EMDICEYARQ  360
SLESEPYILW LLPPVLTAAA MPPRSSLFKI YLVEIDKQLG EAGSKDRPTS TMNQLRNGKV  420
PQYLSPAITV VPALSEVAFP SFSEHRPSYI EREQCGSSIN SFDPSTPMCM LASNFTSDLY  480
INNSESPNGK LSSESYAIDT SGCDSSLPQQ SLYKGNPNSL RMVYPKVSEQ NSWSQEPLPG  540
PFVCPTSVDF FDQQDMAIFD QQIQDNIAAS PRTNLAKQNE WFSSGTSLQY LESSVSAGSV  600
LKAADATSTT PSNYSHCHAQ RNTSNPPNFN ELCSGNIASS NIAPTKPRMR WTPELHERFV  660
DAVNKLGGSE SWSLILCSSY HIFILNFYGT VLFSQEETKA TPKAVQKIMK VDSLTIYHFI  720
IDLNYLMVGE SAKSGQMDEV SSQPLKGMET TCEGLRVQIG LQKQLHEQLE IQRKLQLQVE  780
EHSKYLAMII EKQSESLRQL GALPRSLDAP TQVLDNRETC EGQTGDADSA EQKPEKGMHN  840
LEISEETPYA GSLAAGSDNQ G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0663820.0AK066382.1 Oryza sativa Japonica Group cDNA clone:J013064K05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0CT080.0A0A0E0CT08_9ORYZ; Uncharacterized protein
STRINGOMERI02G34190.30.0(Oryza meridionalis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.16e-31phosphate starvation response 1