PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI02G11060.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family BES1
Protein Properties Length: 350aa    MW: 35888.8 Da    PI: 9.3241
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI02G11060.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822187.45.8e-5851181111
           DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspes 92 
                      gg+gr ptw+ErEnn+rRERrRRaiaakiyaGLRa+Gny lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+  e a++ g+s sasp+s
  OMERI02G11060.1   5 GGGGRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYTLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPasELADQLGRSPSASPCS 98 
                      689*************************************************************************988999************ PP

           DUF822  93 slqsslk.ssalaspvesys 111
                      s+q s++ +s+++s  +s++
  OMERI02G11060.1  99 SYQPSPRgTSSFPSSGSSSQ 118
                      ***55441556666655554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.3E-636142IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MMNGGGGGRV PTWRERENNR RRERRRRAIA AKIYAGLRAY GNYTLPKHCD NNEVLKALCN  60
EAGWTVEPDG TTYRKGCKPP ASELADQLGR SPSASPCSSY QPSPRGTSSF PSSGSSSQIT  120
LGGGGGGGGE GSSLIPWLKT LSSAGVGIGG GSSSKFPAHY SYFGGGSISA PVTPPSGSPP  180
RTPRLKTAAW EEYHHHAGSV LPPWATVDAS YAYAASSLPN STPPSPRRKV AAAAAAAAGG  240
NDAAAWLAGF QISSAGPSSP TYSLVAPPPN PFGAAAAAAG SSSRVMSGAC SPVAGGDVQM  300
ADVARREFAF GGEGKMTGLV KAWEGERIHE ECGSDDLELT LGSSMTRGDR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
GenBankAP0040700.0AP004070.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1705_E12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015624154.11e-175PREDICTED: protein BZR1 homolog 4 isoform X1
SwissprotQ6EUF11e-177BZR4_ORYSJ; Protein BZR1 homolog 4
TrEMBLA0A0E0CIE20.0A0A0E0CIE2_9ORYZ; Uncharacterized protein
STRINGORGLA02G0088400.11e-170(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-51BES1/BZR1 homolog 4