PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI01G32080.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 309aa    MW: 33282.4 Da    PI: 10.2295
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI01G32080.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.93.3e-16239289556
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                      +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN +Lk + +el +++
  OMERI01G32080.1 239 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLK-RQKELDELI 289
                      79***************************************9.666666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-14234282No hitNo description
SMARTSM003388.0E-11235307IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.392237282IPR004827Basic-leucine zipper domain
CDDcd147077.87E-24239293No hitNo description
SuperFamilySSF579593.38E-11239284No hitNo description
PfamPF001705.5E-13239282IPR004827Basic-leucine zipper domain
PROSITE patternPS000360242257IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MGSQTMASKA GGGGVAQRGV GRMRSLGRQG SMYSLTLDEV QSQLGEPLHS MNLDELLRSV  60
FPDGLAIADG AGAGAGAGAT TSSQQQHQPG SGLLRQGSIT MPPELSKKTV DEVWKGIQAA  120
PKRNAETGGG GRRRRERQPT LGEVTLEDFL VKAGVVTQGS LKELSDAGNV DPVGRGVTAT  180
GTVDLAPGSH WIEQYKQQIA STDAHHHGQQ GMIGGMSDSQ TPGRKRGMSG DVADKLMERR  240
QKRMIKNRES AARSRARKQA YTNELENKVS RLEEENVRLK RQKELDELIC AVPVPEPKYQ  300
LRRTSSADF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130137GRRRRERQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0032470.0AP003247.4 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0425G02.
GenBankAP0035700.0AP003570.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0432B10.
GenBankAP0043310.0AP004331.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07.
GenBankAP0149570.0AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015627754.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES39e-83AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0E0C9D90.0A0A0E0C9D9_9ORYZ; Uncharacterized protein
STRINGOMERI01G31540.10.0(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27073883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.19e-72ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]