PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI01G31730.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 453aa    MW: 48899.8 Da    PI: 6.8716
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI01G31730.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.62.3e-07194214525
                      CHHHCHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKk 25 
                      k  rr+++NReAAr+sR+RKk
  OMERI01G31730.2 194 KTLRRLAQNREAARKSRLRKK 214
                      788*****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-5185214No hitNo description
PROSITE patternPS000360197212IPR004827Basic-leucine zipper domain
PfamPF141443.7E-32250325IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MLIAVGGEME GGRLGGAAAS ASAAAADARG GMSGFAAPQH AIHTNLNNVQ PTQVTDFGAL  60
AQSAGFRIED LANLSTNGLF NLKSNAHTII NDPLQFENYV KSISPSNITT TATVTVVDPQ  120
TLVPQKGAQL NLVTIRTGNV ENWGESTIAD TSPRTDTSTD PDTDERNQMF EQGQLAAPTA  180
SDSSDRSKDK LDHKTLRRLA QNREAARKSR LRKKGIFIST SSDQSHSASG NGALAFDMEY  240
ARWLEEHNKH INELRAAVNA HAGDNDLKST VDSIMAHYNE IFKLKGVAAK ADVFHVLSGM  300
WKTPAERCFM WLGGFRSSEL LKLLAGQLEP LTEQQLAGIA NLQQSSQQAE DALSQGMEAL  360
QQSLAETLAS GSLGPAGSSG NVANYMGQMA MAMGKLGTLE NFLRQADNLR LQTLQQMQRI  420
LTTRQSARAL LAISDYFSRL RALSSLWLAR PRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0512970.0AB051297.1 Oryza sativa OsNIF4 mRNA for bZIP transcription factor, complete cds.
GenBankAY6204150.0AY620415.1 Oryza sativa (japonica cultivar-group) clone P0702B09 bZIP transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015651146.10.0transcription factor TGAL1
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A0E0C9780.0A0A0E0C978_9ORYZ; Uncharacterized protein
STRINGORUFI01G37800.10.0(Oryza rufipogon)
STRINGONIVA01G39320.10.0(Oryza nivara)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-126bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]