PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI01G17490.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 185aa    MW: 19191 Da    PI: 10.0607
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI01G17490.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.5e-1145103563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      ++ +rk++NR++A+rsR+RK+++++eL+  v++L a N aL   + e    +a++++e+
  OMERI01G17490.1  45 RKRKRKESNRLSAQRSRARKQQQLDELAGQVAALRARNGALGLAAREAARRCAAVRAEN 103
                      6789*************************************999999999998888877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-1241105IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.2E-94385No hitNo description
PROSITE profilePS5021710.1854385IPR004827Basic-leucine zipper domain
PfamPF001702.8E-845102IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-84585No hitNo description
CDDcd147024.01E-154685No hitNo description
PROSITE patternPS0003604863IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MASPGVVSAI TPTSSAGSDQ AVAAAGGEEA RRPVAGVAPA VMEERKRKRK ESNRLSAQRS  60
RARKQQQLDE LAGQVAALRA RNGALGLAAR EAARRCAAVR AENELLRARS VELAARLDSL  120
TDLAQCLHDA AAASSFAAAP PMMMAGAATV FPTGAAAAAA GFMMPQLPPP LLDATTMGMH  180
CNYYY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14449RKRKRK
24450RKRKRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1105260.0AK110526.1 Oryza sativa Japonica Group cDNA clone:002-167-H10, full insert sequence.
GenBankAP0042330.0AP004233.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17.
GenBankAP0043610.0AP004361.4 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24.
GenBankAP0149570.0AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015641337.15e-96ocs element-binding factor 1
TrEMBLA0A0E0C3B81e-126A0A0E0C3B8_9ORYZ; Uncharacterized protein
STRINGOMERI01G16700.11e-127(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137572428