PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB12G13750.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 204aa    MW: 22725.4 Da    PI: 9.6568
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB12G13750.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.7e-114098563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                  kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+   + l++e+
  OB12G13750.1 40 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTSGLTAEN 98
                  9**********************************************999988888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-1536100IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.02438101IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.5E-114094No hitNo description
SuperFamilySSF579594.64E-114091No hitNo description
PfamPF001701.7E-94097IPR004827Basic-leucine zipper domain
CDDcd147031.01E-204190No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MDGVNSPFEG ESALSGGLPD YAKKAMPAER IAELALIDPK RAKRILANRQ SAARSKERKI  60
KYTSELERKV QTLQTEATTL SAQLTLLQRD TSGLTAENRE LKLRLQSMEE QAKLRDALNE  120
ALREEVQRLK IAAGQAPNMN GNPFNGGLQQ QIPPYYTQQQ QQQQQMSYLG GHQAQQRHPS  180
HQQSSSNGSQ SLSGQSLNDS MDFM
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0659950.0AK065995.1 Oryza sativa Japonica Group cDNA clone:J013048G15, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006664361.11e-145PREDICTED: transcription factor VIP1-like, partial
SwissprotQ9MA753e-57VIP1_ARATH; Transcription factor VIP1
TrEMBLJ3NBL71e-147J3NBL7_ORYBR; Uncharacterized protein
STRINGOB12G13750.11e-146(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.13e-43VIRE2-interacting protein 1