PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB11G13300.1
Common NameLOC102715064
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 230aa    MW: 25426.5 Da    PI: 9.69
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB11G13300.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.6e-1067125563
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                   kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+   + l++e+
  OB11G13300.1  67 KRAKRILANRQSAARSKERKIKYTSELEKKVQTLQTEATTLSTQLTLLQRDTSGLTAEN 125
                   9**********************************************999888888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-1563127IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.01365128IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-1167118No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-1167121No hitNo description
PfamPF001702.7E-967124IPR004827Basic-leucine zipper domain
CDDcd147037.76E-1668104No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MRSLSLDAAF FEGLPFQGGI GGGAGHKRSG SMDGESSLFE GESAPPDYAK KAMPADRLAE  60
LSLLDPKRAK RILANRQSAA RSKERKIKYT SELEKKVQTL QTEATTLSTQ LTLLQRDTSG  120
LTAENRELKL RLQSMEEQAK LRDALNDALR EEVQRLKIAA GQVPNMNGNS FNGGMQHQQQ  180
QMPTYFSQPQ QMHYLGGHQG RHHHPNNSHS SLNGGQSMSG QTLNDSMDFM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8285020.0CT828502.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA011L18, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015698033.11e-169PREDICTED: transcription factor VIP1-like
SwissprotQ9MA754e-62VIP1_ARATH; Transcription factor VIP1
TrEMBLJ3N6941e-169J3N694_ORYBR; Uncharacterized protein
STRINGOB11G13300.11e-169(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.12e-50VIRE2-interacting protein 1