PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB11G12720.1
Common NameLOC102720556
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 481aa    MW: 52572.8 Da    PI: 6.8634
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB11G12720.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.98.2e-12177205533
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                   k  rr+++NReAAr+sR+RKka+i++Le 
  OB11G12720.1 177 KTMRRLAQNREAARKSRLRKKAYIQQLES 205
                   6679***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.001172247IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-7175214No hitNo description
PROSITE profilePS502178.887175219IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.63E-7177210No hitNo description
CDDcd147082.08E-20177228No hitNo description
PfamPF001706.7E-9177206IPR004827Basic-leucine zipper domain
PROSITE patternPS000360180195IPR004827Basic-leucine zipper domain
PfamPF141442.3E-28256330IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MGEASSSSGQ SRQSPHVLGY GFHGTMPNPM PSANFFEQGG ATYFGELEEA LMQQVATLRR  60
TQQTATTTST LHHGDTTPFS TTATATARPP PTLDIFPSWP MRSLHTPKEG SNVTADTTDS  120
ESSSKNNSNQ NASSDQHGLV GDMAGQFDQT PQQQQHKKMA TNSPTHSSKS GKALDPKTMR  180
RLAQNREAAR KSRLRKKAYI QQLESSKLKL AQMEQDIHRA RSQGLLLGAP GGNTSSGAAM  240
FDVEYARWLE EDSRRMAELH GGLHAHLPDS DLRAIVDDTL THYNQLFALK GMAAKADVFH  300
LITGIWATPA ERCFLWMGGF RPSELLKTLI PQLDPLTEQQ VAGICSLQQS SQQAEEALSQ  360
GLEQLHQSLA ETVAGGSPLD DVNVGSFMGH MAIALSQLSN LEGFVIQADN LRQQTIHQMH  420
RILTVRQAAR CFLAIGEYHN RLRALSSLFA SRPREILVAD EGNCGELSIA AHPSESQFST  480
F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0694110.0AK069411.1 Oryza sativa Japonica Group cDNA clone:J023013G15, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006662738.20.0PREDICTED: transcription factor HBP-1b(c38)-like
RefseqXP_015698112.10.0PREDICTED: transcription factor HBP-1b(c38)-like
TrEMBLJ3N6360.0J3N636_ORYBR; Uncharacterized protein
STRINGOB11G12720.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-136bZIP family protein