PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB09G13080.1
Common NameLOC102706317
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 157aa    MW: 17641.7 Da    PI: 9.8043
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB09G13080.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.54e-153183355
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55
                  e+kr rrk++NRe+ArrsR RK++ ++eL+  v +L+++N++L   l   +++
  OB09G13080.1 31 ERKRKRRKESNRESARRSRMRKQQHLDELTSQVNQLKSQNQQLSMALGLTTQN 83
                  79*****************************************9877766655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-122577No hitNo description
SMARTSM003389.0E-162993IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.3693194IPR004827Basic-leucine zipper domain
PfamPF001706.7E-123178IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-123386No hitNo description
CDDcd147021.26E-153482No hitNo description
PROSITE patternPS0003603651IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MSSGTSSGWS RGTRSSRSED DHELNLQAQM ERKRKRRKES NRESARRSRM RKQQHLDELT  60
SQVNQLKSQN QQLSMALGLT TQNLVAVQAQ NSVLQTQKME LQSRLCALTE ILMCMNSSTT  120
TTTSAATTIP ATASACDVFG ASSWNQTPID LYQYQCF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13136RKRKRR
23137RKRKRRK
33138RKRKRRKE
43237KRKRRK
53338RKRRKE
64552RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8330401e-150CT833040.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105H15, full insert sequence.
GenBankCT8330391e-150CT833039.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA019A05, full insert sequence.
GenBankAK0988691e-150AK098869.1 Oryza sativa Japonica Group cDNA clone:J013001A19, full insert sequence.
GenBankAK0723601e-150AK072360.1 Oryza sativa Japonica Group cDNA clone:J023058F04, full insert sequence.
GenBankAK0649031e-150AK064903.1 Oryza sativa Japonica Group cDNA clone:J013000L18, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006660520.11e-112PREDICTED: ocs element-binding factor 1-like
TrEMBLJ3MWC91e-112J3MWC9_ORYBR; Uncharacterized protein
STRINGOB09G13080.11e-112(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-12basic leucine-zipper 44