PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB07G13970.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 379aa    MW: 40646.7 Da    PI: 4.9557
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB07G13970.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.22e-14184235152
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                   ++e+k+ +rk++NRe+ArrsR RK a+++ Lee v+ L  eN++L  +l   
  OB07G13970.1 184 DEEDKVKKRKESNRESARRSRSRKAARLKDLEEQVALLRVENSSLLRRLADA 235
                   579****************************************999666544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.7E-13184248IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-10184239No hitNo description
PfamPF001703.6E-11185235IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.932186238IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-8188235No hitNo description
PfamPF124982.6E-20255353IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MLERCPSGWN LERFLEELDG VPAPADGPAF YPSPMAPAAA ARGGGRGYGE RGAVGVISAP  60
PAAIAVVLDP VEYNAMLKRK LDEDLAAVAM WRASGAIQSE SPLGNKTSLN AVGSSLSSQK  120
CIEGNGIPVQ KLSPGPTVGS GPYVIQNIDA HSKQATSGSS REPSPSEDDD MEGEAEAMGN  180
MILDEEDKVK KRKESNRESA RRSRSRKAAR LKDLEEQVAL LRVENSSLLR RLADANQKFS  240
AAAIDNRVLM ADIETLRAKV RMAEESVKMV TRARQLHQAI PDMPPSLNIA SDASVPIQTN  300
NPMNYFTTPT NTVVNNSYMP EVSARKIDPT DSLQLQQQQM ASLQHLQNGA CGGGEGSNGY  360
ATWGSSLLDA SELVNMELQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0534720.0AB053472.1 Oryza sativa mRNA for RISBZ1, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658337.10.0PREDICTED: regulatory protein opaque-2-like
TrEMBLJ3MJ150.0J3MJ15_ORYBR; Uncharacterized protein
STRINGOB07G13970.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.15e-21basic leucine zipper 25