PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB02G17160.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 180aa    MW: 20287.8 Da    PI: 11.1238
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB02G17160.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.53.8e-1572133162
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                   +ke kr +r+ +NR++A+  R+RKka++  Le kvkeLe++N++L ++ ++l++e + l++ 
  OB02G17160.1  72 DKEHKRLKRLLRNRVSAQQARERKKAYLNDLEVKVKELEKKNSELEERFSTLQNENQMLRQI 133
                   5899*****************************************************99876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-1472136IPR004827Basic-leucine zipper domain
PfamPF001709.0E-1473134IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.58774137IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-1676136No hitNo description
SuperFamilySSF579592.13E-1376134No hitNo description
CDDcd147042.85E-1777128No hitNo description
PROSITE patternPS0003607994IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010017Biological Processred or far-red light signaling pathway
GO:0010099Biological Processregulation of photomorphogenesis
GO:0010114Biological Processresponse to red light
GO:0010218Biological Processresponse to far red light
GO:0010224Biological Processresponse to UV-B
GO:0031539Biological Processpositive regulation of anthocyanin metabolic process
GO:0042753Biological Processpositive regulation of circadian rhythm
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003690Molecular Functiondouble-stranded DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MKLKLKHTQN LFVPARMQEQ ATSSRPSSSD RSSSSGGHHM EIKEGAAGGG SERAQSSTAQ  60
ASARRRGRSP ADKEHKRLKR LLRNRVSAQQ ARERKKAYLN DLEVKVKELE KKNSELEERF  120
STLQNENQML RQILKNTTVS RRGPGSSATG EGYYHVIERI NVSFWLDQVT GQVFNSLGHI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2oqq_B1e-1397136342Transcription factor HY5
2oqq_A1e-1397136342Transcription factor HY5
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00117ampDAPTransfer from AT5G11260Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8337681e-130CT833768.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA034A06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015688502.11e-81PREDICTED: transcription factor HY5-like
SwissprotQ9SM508e-41HY5_SOLLC; Transcription factor HY5
TrEMBLJ3LAP91e-130J3LAP9_ORYBR; Uncharacterized protein
STRINGOB02G17160.11e-130(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140838111
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.11e-20bZIP family protein