PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OBART10G07150.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family TCP
Protein Properties Length: 215aa    MW: 22632.4 Da    PI: 7.7712
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OBART10G07150.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP24.11.2e-071151454373
              TCP  43 kdsktieWLlqqakpaikeltgtssssasec 73 
                       d++ti+WLl+ a+p+i+ +t+t +++as +
  OBART10G07150.1 115 FDGQTIDWLLRLAEPSIIPATSTITTPASLS 145
                      59*********************66666222 PP

Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MGEGNGEEEA TSGKSILSQR NAAAVTHPNS YWRSLKEGLC EVQETSVGEA LVMVVGIGGS  60
RVAAEGEAGI VPHQFHGGGS SGTALEKHLV PATSNTDGTV LTVRKPPSKD SHSKFDGQTI  120
DWLLRLAEPS IIPATSTITT PASLSTSSPF SLHSNDLLFP YSAPFILGKH LHAADNHKPP  180
PSRSLPLPTP PPRASGRFPR GPTSASSIAS WLCWR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0839451e-156AC083945.3 Oryza sativa Japonica Group chromosome X clone OSJNBa0058E19, complete sequence.
GenBankAC0930931e-156AC093093.5 Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete sequence.
GenBankAP0149661e-156AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025876413.13e-71LOW QUALITY PROTEIN: transcription factor TCP23-like
TrEMBLA0A0D3HCQ31e-154A0A0D3HCQ3_9ORYZ; Uncharacterized protein
STRINGOBART10G07150.11e-154(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2383522