PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009628976.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Trihelix
Protein Properties Length: 291aa    MW: 33429.9 Da    PI: 5.566
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009628976.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.61.8e-1424114186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +Wt++ + +L++a  ++  +l+rg l++++W++v++ +     +  + +r+ +qCk++++ l+kryk +k+   + + + +s++p+f++l+
  XP_009628976.1  24 CWTEEATWTLVDAWGRRYIELNRGFLRQTDWQQVADSVnalhgHTAKTRRTDIQCKNRIDTLKKRYKVEKAKIVESNGTLTSSWPFFERLD 114
                     8**************************************999999999*******************9999998888788889*****997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510298.55419121IPR006578MADF domain
PfamPF138374.2E-2322115No hitNo description
Gene3DG3DSA:1.10.601.105.6E-4186278No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MGEITAPSIQ VTAPSRPLPF REDCWTEEAT WTLVDAWGRR YIELNRGFLR QTDWQQVADS  60
VNALHGHTAK TRRTDIQCKN RIDTLKKRYK VEKAKIVESN GTLTSSWPFF ERLDFLIGNF  120
GNKVTAVMVS PLPLPSRSPP MGVPLPNRRS MTTTTAAPVV TPVVLPQKRQ MPVLDDSYFR  180
RNYSAVAAAA AATAGGEEDY DDEEEEEEEE DMGMSEEKDG MRRLAKAIER FGEIYERVEE  240
MKQRQMVELE KQRMQFAKDL EVQRMQLFMD TQVQLQKIKH TKRSGSDDIY S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009628976.10.0PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLA0A1S3ZEQ50.0A0A1S3ZEQ5_TOBAC; trihelix transcription factor ASIL2-like
STRINGXP_009628976.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.11e-38sequence-specific DNA binding transcription factors