PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009623541.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 516aa    MW: 57576.6 Da    PI: 6.9267
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009623541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.86.6e-10213250542
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                     k  rr+++NReAA++sR+RKka++++Le     L++  
  XP_009623541.1 213 KTLRRLAQNREAAKKSRLRKKAYVQQLESSRIRLSQLE 250
                     7789***********************98655555444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-7207255No hitNo description
SMARTSM003383.8E-7209286IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.151211255IPR004827Basic-leucine zipper domain
PfamPF001702.3E-7213251IPR004827Basic-leucine zipper domain
CDDcd147089.55E-22213265No hitNo description
SuperFamilySSF579598.84E-7213255No hitNo description
PROSITE patternPS000360216231IPR004827Basic-leucine zipper domain
PfamPF141449.1E-31294368IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    Send to blast
MVLLRPKPKN GLKGVCMASE GIGETGLTNS GPSNLHNMPY AVFRGLNPAS TSFMYHSTPN  60
NQEGSFDFGE LEEAFALQGF KINNDEAKAS LYAAATGKPA ATLDMFPSWP MRFQETPREN  120
SKSREEEIST DSGSLSSRAQ GHLEPESPIS RKASSEQNQL QITQQQQQQQ LHQEMSSDNN  180
PRTENLQTEL ASKPNTEKRK GAGSTSERMA DPKTLRRLAQ NREAAKKSRL RKKAYVQQLE  240
SSRIRLSQLE QELQRARSQG VFLGGGTSAG ANISSGAALF DMEYSRWLDD DHRHMSELRT  300
ALQTHLSDGD LRLIVDGYIA HYDEIFSLKG VAAKCDVFHL ITGAWTTPAE RCFLWMGGFR  360
PSELIKMLIG QLDPLTEQQL MGIYSLQQSS QQAEEALSQG LEQLQQSLID TVVSGSINDG  420
MHHMALALGK LSNLEGFVRQ ADNLRQQTLH QLHRILTVRQ AARCFLVIGE YYGRLRALSS  480
LWLSRPRETL IPDDSSCQTT TELQMVHSSQ NHFSNF
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT6933870.0KT693387.1 Capsicum annuum AILZ1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623541.10.0PREDICTED: transcription factor TGA2.1-like isoform X1
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A1S3Y3E90.0A0A1S3Y3E9_TOBAC; transcription factor TGA2-like isoform X1
STRINGXP_009623541.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]