PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009619775.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 183aa    MW: 20627.5 Da    PI: 8.4848
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009619775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.64e-121766555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                     + +E++RR++++  + +L +l+P++  ++s+  ls  + Le+A++YIk Lq
  XP_009619775.1 17 RKTIEKNRRNQMKALYLKLHSLVPNQ--QHSREvLSLPDQLEEAINYIKRLQ 66
                    6789*********************6..488889*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.63E-71070No hitNo description
SuperFamilySSF474596.41E-121182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.6611265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.0E-111484IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-81866IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MEQQCNNPSS SSSKADRKTI EKNRRNQMKA LYLKLHSLVP NQQHSREVLS LPDQLEEAIN  60
YIKRLQIDLE RMTQKKDSLK RGENSSSNSS CGRKTGLSLP HIEIHSVDSA LQVVLTTGLD  120
YQFIFTDVIR LLHEEGVQVI NASYTLICDT IVHSIHSKMG ECAPDQYGAA RISERLKKFV  180
GGC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009619775.11e-134PREDICTED: transcription factor bHLH55-like
RefseqXP_016435311.11e-134PREDICTED: transcription factor bHLH55-like
TrEMBLA0A1S3X6391e-133A0A1S3X639_TOBAC; transcription factor bHLH55-like
STRINGXP_009619775.11e-134(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51052131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-37bHLH family protein