PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009613713.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 508aa    MW: 56517.3 Da    PI: 6.738
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009613713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.22.4e-10203243441
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                      k  rr+++NReAAr+sR+RKka++++Le+   + ++Le+e
  XP_009613713.1 203 AKTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLEQE 243
                     6889************************9733355555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-5200267IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.3E-8201248No hitNo description
PROSITE profilePS502179.163202246IPR004827Basic-leucine zipper domain
PfamPF001702.9E-7203243IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.9E-6204246No hitNo description
CDDcd147085.99E-21204254No hitNo description
PROSITE patternPS000360207222IPR004827Basic-leucine zipper domain
PfamPF141444.9E-31286361IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    Send to blast
MESQRIGESG SLSAESGPSH HHHNMSYALF RGLNPPNTSF MYHSTPNNQE PPAFDFGELE  60
EAIVLQGVKM SNDEAAKASL YAATNRPAAT LEMFPSWPTR FHHTPRGSSK SGEESSDSGS  120
ALNTFSSRGE PHLEPESPVS GKPSSDYQSL EQNQQQIQIP QQQLQEMASD SPRTIVSHIE  180
PASKPNYEKR KGAGSTSDRV VDAKTLRRLA QNREAARKSR LRKKAYVQQL ETSRIRLAQL  240
EQELQRARSQ GLFMGGGAAA GANISSAGAA IFDMEYSRWL DDDQRHISEL RTALQAHLGD  300
GDLRIIVDGY IAHYDEIFLL KGVAAKSDVF HLITGMWTTP AERCFLWMGG FRPSELIKML  360
ITQLDPLTQQ QVVGIYSLQQ SSQQAEEALS QGLEQLQQSL IETVATGSLN DGMHHMAVAL  420
GKLANLEGFV RQADNLRQQT LHQLHRILTV RQAARCFLVI GEYYGRLRAL SSLWASRPRE  480
TMMVDDNSCQ TTTELQMIQA SQHHFSNM
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009613713.10.0PREDICTED: transcription factor TGA2.2-like isoform X1
RefseqXP_018629855.10.0PREDICTED: transcription factor TGA2.2-like isoform X1
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A1J6IMX90.0A0A1J6IMX9_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1
STRINGXP_009613713.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-178bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]