PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009613624.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Trihelix
Protein Properties Length: 379aa    MW: 42481.2 Da    PI: 9.3466
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009613624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix61.71.7e-1932123187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqlea 87 
                     +Wt++e+laLi+a+re++ +lrrg l+ ++W++v++++     +    +++ qC++k+e+l++ry+++k+++    t +  s++ +fd+++a
  XP_009613624.1  32 CWTQEETLALIDAYRERWYALRRGYLRTADWDAVAAAVtsrcPDASPAKTSAQCRHKMEKLRQRYRAEKQRSLASpTGRFFSSWFFFDNMDA 123
                     8************************************977776667788999*****************9988776889999*******985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.1E-2031124No hitNo description
PROSITE profilePS500906.8063393IPR017877Myb-like domain
SMARTSM005958.2E-1040129IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MSSNLDVTVA ETSPPAVEEK PPPPARRFPP PCWTQEETLA LIDAYRERWY ALRRGYLRTA  60
DWDAVAAAVT SRCPDASPAK TSAQCRHKME KLRQRYRAEK QRSLASPTGR FFSSWFFFDN  120
MDAMENGTTV ASIKLNQQLA EKQVPSIDPN LLKLKINQKN GVNFLDDWTP NIMLNHGVAK  180
TPERNIFSSK IPNGYCFNKE EMPNDVEFGS GFRVKTGISM KSKRSIMNST SFDCDEGSEY  240
NGSSNASDGF HVRNFGENFG ISSSRRNCGG NVEPNVDSRF STPKLGKKGG GVGSGGGGVK  300
RGRDPIEEMV LSIRLLGEGF MKVEKMKMEM AKEVEQMRME MEMKRNEMIL QSQKQIVDAF  360
VKVLNEVNNK NKNVVSPES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009613624.10.0PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLA0A1S3Z3350.0A0A1S3Z335_TOBAC; trihelix transcription factor ASIL2-like
STRINGXP_009613624.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA127741617
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-31Trihelix family protein