PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009607761.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 373aa    MW: 43716.4 Da    PI: 10.1523
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009607761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.87.5e-3185138255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtp+LH +Fv+a+e+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  XP_009607761.1  85 PRLRWTPDLHLSFVRAIERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 138
                     8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.8E-2881139IPR009057Homeodomain-like
PROSITE profilePS5129411.72281141IPR017930Myb domain
SuperFamilySSF466894.48E-1484139IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-2285140IPR006447Myb domain, plants
PfamPF002491.2E-886137IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MFLHQETLCS NVCLRLIASE KYMEKVSYSI DLNEEANNKR ETDETIELSD DMIEKTAEGN  60
SSSEDIGNYE NKSSRVRQYV RSKLPRLRWT PDLHLSFVRA IERLGGQERA TPKLVLQMMN  120
VRGLSIAHVK SHLQMYRSKK LGEFGQVLGH AHRAMQGKSY FCGNLSQRFN PLQDFKMKNG  180
AIVLARNFNN DDNVNHHFQN SLSRHRHETK EKFSRYLEWS SNQGTNNLFR MKILQTGNHE  240
IGPVRQSHFL EEKRWPPNEF KENQYWKKKR VSLSSIPSNK NSQSLFHQNN FVQQPMWRCR  300
YNSLEPKFET PFRPEMKRDK RLSKKDWLLP DFQLGVSTID NNKEKIHHSK KESDSTINTM  360
LSLSLPSYSS SAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-1786140458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-1786140458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-1786140357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-1786140357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-1786140357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-1786140357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-1786140458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-1786140458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-1786140458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-1786140458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-1786140458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-1786140458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755155e-36HG975515.1 Solanum lycopersicum chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009607761.10.0PREDICTED: putative Myb family transcription factor At1g14600 isoform X1
TrEMBLA0A1J6K8340.0A0A1J6K834_NICAT; Putative myb family transcription factor
STRINGXP_009607761.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55162334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-39G2-like family protein