PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009605887.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 193aa    MW: 21812.3 Da    PI: 7.6706
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009605887.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.8e-17116166255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+      r++lg++ t  +Aa+a++ a+ k++g
  XP_009605887.1 116 HYRGVRRRP-WGKFAAEIRDPTRK--GSRVWLGTYETDVDAARAYDCAAFKMRG 166
                     8********.**********8542..4**********99*************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.15E-29115174No hitNo description
Gene3DG3DSA:3.30.730.101.5E-31115174IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-22116175IPR016177DNA-binding domain
PfamPF008477.6E-13116166IPR001471AP2/ERF domain
SMARTSM003803.1E-36116180IPR001471AP2/ERF domain
PROSITE profilePS5103224.487116174IPR001471AP2/ERF domain
PRINTSPR003675.9E-13117128IPR001471AP2/ERF domain
PRINTSPR003675.9E-13156176IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MTTRPEDEED EELTLELISQ HLLGDFTSTD FSFSTLPDDF QPVIFTSDQK PNHFDLHDNF  60
SEFETKPNII LSPTSVTTSV VSNTRIFDDS SLNRTDKKVD GSGYGSSVVE NGKKKHYRGV  120
RRRPWGKFAA EIRDPTRKGS RVWLGTYETD VDAARAYDCA AFKMRGRKAI LNFPFDAGNL  180
SPPANIGRKR RKG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-29113175264ATERF1
3gcc_A9e-29113175264ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186192GRKRRKG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009605887.11e-142PREDICTED: ethylene-responsive transcription factor ERF106-like
TrEMBLA0A1S4BQV71e-121A0A1S4BQV7_TOBAC; ethylene-responsive transcription factor ERF106-like
TrEMBLA0A1U7YYY11e-121A0A1U7YYY1_NICSY; ethylene-responsive transcription factor ERF106
STRINGXP_009605887.11e-141(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.14e-44ERF family protein