PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009604126.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Trihelix
Protein Properties Length: 315aa    MW: 35630.3 Da    PI: 8.8372
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009604126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.82.2e-1623103274
        trihelix   2 WtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 
                     Wt qe+++Liea++ ++er +r++          + +W++v +++++  + rs++qC++kw+nl +++kk++e e++++++
  XP_009604126.1  23 WTVQETMVLIEAKKMDDERRNRRQgdinergkPTELRWKWVEDYCWRNSCLRSQNQCNDKWDNLMRDFKKVREYERREAKK 103
                     **************999999975333334433999****************************************997544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.0971587IPR017877Myb-like domain
PfamPF138375.1E-1222102No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MDNILVGDQG GSSMLRDYRK GNWTVQETMV LIEAKKMDDE RRNRRQGDIN ERGKPTELRW  60
KWVEDYCWRN SCLRSQNQCN DKWDNLMRDF KKVREYERRE AKKAAEVGEE ITSYWKIEKN  120
ERKEKSLPTN MLPEIYEALV EIVDRKGQKM LPASLLPTLQ QQSTQPQITA LPLPPPPLPP  180
PTTAVVAQTA APQLSDVAYT GQYPFPTVDS PAKKRRMSGE GTSSGTAKGN INNSSQEVGS  240
AISKSAVIIA EAIQSCEERE EKRHRELLSL HERRLKIEES KAEINREGIN GLVDSINKLA  300
NSILALAGNK NQSAP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009604126.10.0PREDICTED: trihelix transcription factor ASR3-like isoform X3
TrEMBLA0A1S3XZW30.0A0A1S3XZW3_TOBAC; uncharacterized protein LOC107770676
STRINGXP_009604113.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-50Trihelix family protein