PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009603665.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Trihelix
Protein Properties Length: 370aa    MW: 41186.5 Da    PI: 10.4595
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009603665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.26.6e-16100190186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++  +++Liea  ++  +l+rg+l+ ++W+ev++++     + ++  r+ +qCk++++ l+k+yk +k++ ++ + + +st+p+f++l+
  XP_009603665.1 100 CWSEAATHTLIEAWGSKYVELNRGNLRHQQWQEVADAVnalhgHTKKQYRTDIQCKNRIDTLKKKYKIEKTRVSQSQGRYVSTWPFFSSLN 190
                     7*************************************999987778889*************************9999********9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.2E-2598190No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MFRRHGHTNN PSPHSSSNPN SSTTSHFLSA GAAAASRSRT MSDDDDHLAS PFSIKNSPSS  60
SPSPPPPCTD DKLLALPPPP MLTPASVSAR TPIFPAREDC WSEAATHTLI EAWGSKYVEL  120
NRGNLRHQQW QEVADAVNAL HGHTKKQYRT DIQCKNRIDT LKKKYKIEKT RVSQSQGRYV  180
STWPFFSSLN PLIGVTYKVS PSPSPETFIP QRRKSPSPSP ATFTPQWRSS PPLLPPPLFG  240
IPVGLRSKRP AAAMDYTVSR RNFSAMAAAA AAASEDSGEE DEEGLEKSSR KRSGGVVVEG  300
GGYRRIAEAI GRFGEIYERV EKAKQRQMVE LEKQRMQFAK DLEIQRMKLI MESQLHLQKL  360
NRSKPHFTSR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009603664.20.0PREDICTED: trihelix transcription factor ASIL1-like isoform X1
RefseqXP_009603665.10.0PREDICTED: trihelix transcription factor ASIL2-like isoform X2
TrEMBLA0A1S3ZQP40.0A0A1S3ZQP4_TOBAC; trihelix transcription factor ASIL2-like
TrEMBLA0A1U7XBV80.0A0A1U7XBV8_NICSY; ras guanine nucleotide exchange factor Y-like
STRINGXP_009603664.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-64sequence-specific DNA binding transcription factors