PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009592010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 130aa    MW: 14794.1 Da    PI: 4.4194
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009592010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.21.5e-1194129240
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtae 40 
                     +y GVr+++ +g+++AeI+dp  +g  +r +lg++ t+e
  XP_009592010.1  94 RYIGVRRRP-WGKFAAEIWDPDRRG--ARLWLGTYETPE 129
                     699******.**********95454..**********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.07E-1194130IPR016177DNA-binding domain
PfamPF008477.8E-794129IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-1594130IPR001471AP2/ERF domain
CDDcd000181.53E-1494130No hitNo description
PROSITE profilePS5103216.34494130IPR001471AP2/ERF domain
SMARTSM003801.4E-494130IPR001471AP2/ERF domain
PRINTSPR003675.8E-795106IPR001471AP2/ERF domain
PRINTSPR003675.8E-7118130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MNPAANATFS FSDLDFLDSI DHHLLINSDF SNSFWPMSSS NVATPNSPSS SFGSCLLDEN  60
IEETTTLESQ SETEEQTQGG KAARERNTKQ DWRRYIGVRR RPWGKFAAEI WDPDRRGARL  120
WLGTYETPED
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB8281510.0AB828151.1 Nicotiana tabacum ERF168 mRNA for ethylene response factor 168, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009592010.19e-93PREDICTED: ethylene-responsive transcription factor ERF106-like, partial
TrEMBLS0BBR22e-74S0BBR2_TOBAC; Ethylene response factor 168
STRINGXP_009592010.13e-92(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-17ethylene-responsive element binding factor 13