PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009587770.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Trihelix
Protein Properties Length: 335aa    MW: 37830 Da    PI: 4.8973
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009587770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix74.12.3e-2333126185
        trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                     rWt+qe+l+Lie+++  eer  rg+         + +p+W +vs+++r++g +r+p+qC+++w+n+  +++kik++e++ +  s s + + ++l
  XP_009587770.1  33 RWTRQETLVLIEGKKIAEERTHRGRksssvfgsdKPEPKWNSVSSYCRQHGANRGPVQCRKRWSNMISDFRKIKAWESQANGSSDSYWIMSNDL 126
                     8**************999999887555677777799*******************************************977777778777666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.3292699IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.3E-632100IPR009057Homeodomain-like
PfamPF138378.3E-1332121No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MIENTTSLAD LVDGQQKPTE GTDDISKTPR HSRWTRQETL VLIEGKKIAE ERTHRGRKSS  60
SVFGSDKPEP KWNSVSSYCR QHGANRGPVQ CRKRWSNMIS DFRKIKAWES QANGSSDSYW  120
IMSNDLRREK KLPGFFDREV YDVMDGKEFT AEAYQLALVT ITTDDKVDYG IETAEEEEEK  180
EEEENEQENT EAEAVSHTDG YIMADDVLFP AMEDIGSNPL KEGIAKDKKA KSIPSPTPIS  240
GTAEGEQPGS DFWKRSMFKD GVKRGRQSPD GCIATSLGYK LLKTMEQNTN MLHAQLDAQI  300
DNRQLDREQQ KEHTDSLIVA LNKVADALAR VADKM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009587770.10.0PREDICTED: trihelix transcription factor ASR3-like
TrEMBLA0A1S4CN580.0A0A1S4CN58_TOBAC; trihelix transcription factor ASR3-like
TrEMBLA0A1U7VZR60.0A0A1U7VZR6_NICSY; trihelix transcription factor GT-2-like
STRINGXP_009587770.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17862460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.15e-60Trihelix family protein