PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009587590.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 256aa    MW: 29893.7 Da    PI: 10.5397
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009587590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like30.48.6e-101213555
         G2-like 35 lmkvkgLtlehvkSHLQkYRl 55
                    +m+v gL+++hvkSHLQ+YR+
  XP_009587590.1  1 MMNVRGLSIAHVKSHLQMYRS 21
                    7*******************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.8E-8122IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MMNVRGLSIA HVKSHLQMYR SKKLGEFGQV LGHAHRPMQG KSYFCGNLSQ RFNPLQDFKM  60
KNGAIVLARN FNNDDNVNHH FQNSLSRHRH ETKEKFSRYL EWSSNQGTNN LFRMKILQTG  120
NHEIGPVRQS HFLEEKRWPP ISEFKENQYG KGKRVSLSNI SSNKNSQSLF QQNNFVQQPK  180
WRCRYNSLEP KFETPFRLEM KRDKRLSETD WLADLQLGLS TVDNNKEQIQ HSKKESDSTI  240
NTMLSLSLPS YSSSAT
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754423e-36HG975442.1 Solanum pennellii chromosome ch03, complete genome.
GenBankHG9755153e-36HG975515.1 Solanum lycopersicum chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009587590.10.0PREDICTED: uncharacterized protein LOC104085296
TrEMBLA0A1J6K8341e-164A0A1J6K834_NICAT; Putative myb family transcription factor
STRINGXP_009587590.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55162334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.19e-11G2-like family protein