PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016514523.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 171aa    MW: 19148.4 Da    PI: 7.8433
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016514523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-201665255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+WvAe+r p++   r r++lg+++taeeAa+a++aa  +l+g
  XP_016514523.1 16 RYKGVRMRK-WGKWVAEVRQPKS---RDRIWLGSYDTAEEAARAYDAAVVCLRG 65
                    69*****99.*******999854...4*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.5E-131665IPR001471AP2/ERF domain
CDDcd000181.60E-311675No hitNo description
Gene3DG3DSA:3.30.730.108.0E-311674IPR001471AP2/ERF domain
PROSITE profilePS5103223.2881673IPR001471AP2/ERF domain
SMARTSM003803.5E-361679IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-221674IPR016177DNA-binding domain
PRINTSPR003673.2E-101728IPR001471AP2/ERF domain
PRINTSPR003673.2E-103955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MVRPKGNKEK KDNGDRYKGV RMRKWGKWVA EVRQPKSRDR IWLGSYDTAE EAARAYDAAV  60
VCLRGPSATI NFPNDPPLIP SSAPNCDQPQ LSPSQIQVAA SRHARRVCES AVVDSRLPAV  120
ETVFFRDNNN SEFGCSSYVD CYNLATTDKT STGDGEVLHD DLFDSARMWT F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1816751474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009791847.11e-126PREDICTED: ethylene-responsive transcription factor ERF016-like
RefseqXP_016514523.11e-126PREDICTED: ethylene-responsive transcription factor ERF016-like
SwissprotQ9C5916e-34ERF16_ARATH; Ethylene-responsive transcription factor ERF016
TrEMBLA0A1S4DM941e-125A0A1S4DM94_TOBAC; ethylene-responsive transcription factor ERF016-like
TrEMBLA0A1U7XIG91e-125A0A1U7XIG9_NICSY; ethylene-responsive transcription factor ERF016-like
STRINGXP_009791847.11e-125(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.12e-26ERF family protein