PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016498957.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family TCP
Protein Properties Length: 309aa    MW: 34713.7 Da    PI: 7.9008
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016498957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP109.16.6e-3421118289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............ssssaseceaesssssa 82 
                     +g+kdrhsk++T++g+RdRR+Rlsa++a++f+d+qd+L +dk+sk+++WL+++ak ai++l+++              +        ++++++ +
  XP_016498957.1  21 TGQKDRHSKVYTAKGPRDRRIRLSALTAIQFYDVQDRLRYDKPSKAVDWLIKKAKNAIDKLVELptwnpsddavlkniP--------TSTEREVG 107
                     799*************************************************************655544444443221........11111111 PP

             TCP  83 snsssg....k 89 
                     s+ +++    +
  XP_016498957.1 108 SSGNIAlephQ 118
                     11111122220 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.1E-3221127IPR005333Transcription factor, TCP
PROSITE profilePS5136931.5312381IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MKRATEGEIV QVEGGRILRS TGQKDRHSKV YTAKGPRDRR IRLSALTAIQ FYDVQDRLRY  60
DKPSKAVDWL IKKAKNAIDK LVELPTWNPS DDAVLKNIPT STEREVGSSG NIALEPHQQS  120
KFSSRFLLQR QLAENPTSDT SYVMPAVEPE TSSVADTSKS FFPINSGTSL MNLLSFPHEA  180
MSRDSIQTED LGLSLHTNLH DQNSNHSANL VNFEANYNPR MANWIPHQQF LSQGGIFSQR  240
EPLQSNFSRL ISHAWELQQP MASAEHKSSI SNSYFNGHFQ FPSRLIQGEE DINGVICIKP  300
SSGSSSFQH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016498958.10.0PREDICTED: transcription factor TCP4-like
RefseqXP_016498957.10.0PREDICTED: transcription factor TCP4-like
SwissprotQ8LPR53e-48TCP4_ARATH; Transcription factor TCP4
TrEMBLM1AJX31e-90M1AJX3_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000243284e-90(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66072234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.32e-49TCP family protein