PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016485808.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 510aa    MW: 56669.3 Da    PI: 6.8356
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016485808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.4e-10205245441
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                      k  rr+++NReAAr+sR+RKka++++Le+   + ++Le+e
  XP_016485808.1 205 AKTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLEQE 245
                     6889************************9733355555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.9E-6202269IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.163204248IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-8204250No hitNo description
PfamPF001702.9E-7205245IPR004827Basic-leucine zipper domain
CDDcd147081.35E-20206256No hitNo description
SuperFamilySSF579591.9E-6206248No hitNo description
PROSITE patternPS000360209224IPR004827Basic-leucine zipper domain
PfamPF141449.3E-32288363IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
MESQRIGESG SLSAESGPSH HHHNMSYALF RGLNPPNTSF MYHSSPNNQE PPAFDFGELE  60
EAIVLQGVKM SNDEAAKASL YATTNRPAAT LEMFPSWPTR FHHTPRGSSK SGGEESSNSG  120
SALNTYSSRG EPHLEPESPI SGKPSSDYQS LEQNQQQQLQ PPQQQLQEMA SDSPRTGVSH  180
SEPASKSNYE KRKGVGSTSD RVVDAKTLRR LAQNREAARK SRLRKKAYVQ QLETSRIRLA  240
QLEQELQRAR SQGLFMGGAA AAGANISSAG AAMFDMEYSR WLDDDQRHIS ELRTALQAHL  300
GDGDLRIIVD GYIAHYDEIF QLKGVAAKSD VFHLITGMWT TPAERCFLWM GGFRPSELIK  360
MLIAQLDPLT QQQVVGIYSL QQSSQQAEEA LSQGLEQLQQ SLIETVANGS LNDGMHHMAV  420
ALGKLANLEG FVRQADNLRQ QTLHQLHRIL TVRQAARCFL VIGEYYGRLR ALSSLWASRP  480
RETMMADDNS CQTTTELQMI QASQHHFSNM
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016485808.10.0PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_016485809.10.0PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_016485810.10.0PREDICTED: transcription factor TGA2-like isoform X1
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A1S4BA790.0A0A1S4BA79_TOBAC; transcription factor TGA2-like isoform X1
STRINGXP_009772593.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-178bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]