PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016481010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 217aa    MW: 24362.1 Da    PI: 7.5619
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016481010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.8e-1794144255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVr++  +g+++AeIrdp  +g  +r +lg++ t+e+Aa a+++a+ k++g
  XP_016481010.1  94 RYIGVRRRA-WGKFAAEIRDPERRG--ARLWLGTYETPEDAALAYDQAAFKIRG 144
                     699***777.**********84444..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.97294152IPR001471AP2/ERF domain
CDDcd000184.12E-2894154No hitNo description
SuperFamilySSF541717.19E-2294153IPR016177DNA-binding domain
SMARTSM003803.8E-3394158IPR001471AP2/ERF domain
PfamPF008473.5E-1294144IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-3094153IPR001471AP2/ERF domain
PRINTSPR003673.4E-1195106IPR001471AP2/ERF domain
PRINTSPR003673.4E-11134154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MNPLDNATFF FSDLDFLDSI EHHLLNDSDF SNSFSPISSS SVATPNSPSS CFCSCLLDEN  60
IEETTTLESQ SEPEEPTQGL KAARAENTKQ NWRRYIGVRR RAWGKFAAEI RDPERRGARL  120
WLGTYETPED AALAYDQAAF KIRGSRARLN FPHLIGSNMP EPARVKGRRH NSRSLEPSSS  180
SSTTSSENGR RKRNIEVINS IAKAKLVGHI RDLEMSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-2693158469ATERF1
3gcc_A3e-2693158469ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB8281500.0AB828150.1 Nicotiana tabacum ERF179 mRNA for ethylene response factor 179, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016481010.11e-160PREDICTED: ethylene-responsive transcription factor 2-like
TrEMBLA0A1S4AWM21e-158A0A1S4AWM2_TOBAC; ethylene-responsive transcription factor 2-like
STRINGXP_009609536.11e-119(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.16e-39ethylene-responsive element binding factor 13