PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016436541.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 157aa    MW: 17793 Da    PI: 4.6365
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016436541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2316.1e-104381855
             AP2 18 eIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     Ir p    +r +r++lg+f tae+Aa+a+++a+ +++g
  XP_016436541.1  4 KIRYP----RRaARVWLGTFNTAEDAAQAYDKAAIEFRG 38
                    56665....2469***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.251146IPR001471AP2/ERF domain
SMARTSM003801.3E-12252IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.6E-19346IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-12446IPR016177DNA-binding domain
CDDcd000181.67E-18545No hitNo description
PfamPF008471.3E-5938IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MVVKIRYPRR AARVWLGTFN TAEDAAQAYD KAAIEFRGPR AKLNFSFADY TSIQQHNTTT  60
SISCSKQQQQ EPIQLEQGIK INANSAGGCG FVVDDSEFLK NLHYEITIEI DCVVSYDWLL  120
NSESVDYVVT GKVCYHLLLD CLVYREFDPF GEVVDGY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2740222e-92AB274022.1 Nicotiana tabacum WRAF2 mRNA for wound-responsive AP2 like factor 2, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016436541.11e-116PREDICTED: ethylene-responsive transcription factor 4-like
TrEMBLA0A1S3X9F31e-114A0A1S3X9F3_TOBAC; ethylene-responsive transcription factor 4-like
STRINGXP_009596565.11e-43(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-13redox responsive transcription factor 1