PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009792659.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 179aa    MW: 20174 Da    PI: 8.3347
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009792659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.3e-121766555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                     + +E++RR++++  + +L +l+P++  ++s+  ls  + Le+A++YIk Lq
  XP_009792659.1 17 RKTIEKNRRNQMKALYLKLHSLVPHQ--QHSREvLSLPDQLEEAINYIKRLQ 66
                    6789*********************6..488889*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.90E-61069No hitNo description
SuperFamilySSF474591.83E-111181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.3441265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-101482IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-81866IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MEQQCNNPSS SSSKADRKTI EKNRRNQMKA LYLKLHSLVP HQQHSREVLS LPDQLEEAIN  60
YIKRLQIDLG RMTQKKDSLK SGENSSCGRK IGLPLPHLEI NSVDSALQVV ITTSLDYQFI  120
FTDVIRLLHE ESVQVINANY TLIGDTIVHS IHSQMGECAP DQYGAARISE RLKKFVGGC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009792659.11e-131PREDICTED: transcription factor bHLH55-like
TrEMBLA0A1U7Y0951e-130A0A1U7Y095_NICSY; transcription factor bHLH55-like
STRINGXP_009792659.11e-131(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51052131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-35bHLH family protein