PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_023109-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family ERF
Protein Properties Length: 211aa    MW: 22425.9 Da    PI: 4.8155
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_023109-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.4e-173585155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   + y+GVr+++  g+Wv+eIr+p+    +  r++lg++ t+e+Aa a++ a+++l+g
  NNU_023109-RA 35 PVYRGVRRRS-GGKWVSEIREPK----KpNRIWLGTYPTPEMAAVAYDVAALALKG 85
                   68*****887.9*********94....468***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.6E-113585IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-293695IPR001471AP2/ERF domain
SMARTSM003804.1E-333699IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-213695IPR016177DNA-binding domain
PROSITE profilePS5103223.0513693IPR001471AP2/ERF domain
PRINTSPR003674.4E-113748IPR001471AP2/ERF domain
CDDcd000184.15E-303795No hitNo description
PRINTSPR003674.4E-117595IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MNYFPRTNSD GRTNAGGSSV ANDADANHLL PCHHPVYRGV RRRSGGKWVS EIREPKKPNR  60
IWLGTYPTPE MAAVAYDVAA LALKGPDAKL NFPLSAASLP VPTSKSPRDI QDAAATAAAA  120
AGAAMDSFSE SPGPGGQAKN DFSSSVTVTS DANYSLVSND YIDEEFLFDM PNLLVNMAEG  180
MLLSPPRLGV VAADDDATIE NTATHNLWSY P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-143798668ATERF1
3gcc_A2e-143798668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010242644.11e-154PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR07e-49ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A1U7YTZ01e-153A0A1U7YTZ0_NELNU; ethylene-responsive transcription factor ERF024-like
STRINGXP_010242644.11e-153(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-40ERF family protein