PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_020205-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family G2-like
Protein Properties Length: 407aa    MW: 45263.2 Da    PI: 7.8647
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_020205-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.64.1e-1193116225
        G2-like   2 prlrWtpeLHerFveaveqLGGse 25 
                    prlrWtp+LH +Fv+ave+LGG+e
  NNU_020205-RA  93 PRLRWTPDLHLSFVHAVEKLGGQE 116
                    8*********************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-989116IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MVGETIDMIE RVEIHEGEST SPLSSQKCSS FDLNEEATSE EDDSTAEVAT VTSELGNGTV  60
ATAAGDDSTD KNSTTEDGER TTTVRQYVRS KMPRLRWTPD LHLSFVHAVE KLGGQEILSE  120
MFYQRNSPYR HFKMDNRSIL LARKAHDSNP LQCLFKDSFS QRSYSFKANP SSCPSDRHED  180
WAFNRQSSMR PVSLSSKDQG QGLSQPSVSY LSSTRGVFTG NGLIRHSQFH EEKRWPPRGM  240
ININQRIKDR TIPANVGWVG TSSQPPPGQI HSGPICFDVA HTLHPPGWIA SSTATNKQYR  300
SCSIPDPLVI SGSFQTELGG TPFRLEWLWQ KQIEVSNLSY GADWSCTKQA MKAVNPPSGS  360
HFPIGMKNHN WSGPAVRSPS AGYSCPFPSQ RRTRSPNNQS YTKELAS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4643163e-31AM464316.2 Vitis vinifera contig VV78X206152.13, whole genome shotgun sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010276999.10.0PREDICTED: uncharacterized protein LOC104611575
RefseqXP_010277000.10.0PREDICTED: uncharacterized protein LOC104611575
TrEMBLA0A1U8B7J00.0A0A1U8B7J0_NELNU; uncharacterized protein LOC104611575
STRINGXP_010276999.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.15e-16G2-like family protein